Metadata

This section contains table with json names for metadata fields. Required metadata are marked by asterisks. Please note that some of the metadata filed accept only specific values, those are: macromolecular type, processing software and space group, accepted values can be found here.

name of metadata fieldjson name / keywords for Advanced Search
Citation Metadata:
Title *title
Author:
Name *
Affiliation
Identifier Scheme
Identifier

authorName
authorAffiliation
authorIdentifierScheme
authorIdentifier
Contact:
Name
Affiliation
E-mail *

datasetContactName
datasetContactAffiliation
datasetContactEmail
Description:
Text *

dsDescription
Subject *subject
Keyword:
Term

keywordValue
Grant Information:
Grant Agency
Grant Agency Short Name
Grant Program
Grant Number

grantNumberAgency
grantNumberAgencyShortName
grantNumberProgram
grantNumberValue
Depositordepositor
Deposit DatedepositDate
Macromolecular Crystallography Metadata:
Sample NamesampleName
PDB IDpdbId
Beamline Institution *beamlineInstitution
Beamline *beamline
Detector Type *detectorType
Data Collection:
Wavelength [Å] *
Crystal-Detector Distance [mm] *
Oscillation-Step Size [°] *
Number of Frames *
Position of the Beam in the X Axis [px] *
Position of the Beam in the Y Axis [px] *
Temperature [K]
Starting Angle [°]
Detector Thickness [mm]
Detector Overload

dataCollectionWavelength
dataCollectionDetectorDistance
dataCollectionOscillationStepSize
dataCollectionNumberOfFrames
dataCollectionOrgX
dataCollectionOrgY
dataCollectionTemperature
dataCollectionStartingAngle
dataCollectionDetectorThickness
dataCollectionDetectorOverload
Unit Cell Parameters:
a [Å]
b [Å]
c [Å]
α [°]
β [°]
γ [°]

unitCellParameterA
unitCellParameterB
unitCellParameterC
unitCellParameterAlpha
unitCellParameterBeta
unitCellParameterGamma
Overall:
Completeness
Mean I/Sigma(I)
CC_1/2
R_merge
R_meas
Resolution Low
Resolution High
Number of Observed Reflections
Number of Unique Reflections
Number of Possible Reflections
Anomalous Correlation
Anomalous Signal

overallCompleteness
overallISigma
overallCc
overallRMerge
overallRMeas
overallDataResolutionRangeLow
overallDataResolutionRangeHigh
overallNumberOfObservedReflections
overallNumberOfUniqueReflections
overallNumberOfPossibleReflections
overallAnomalousCorrelation
overallAnomalousSignal
Highest Resolution Shell:
Completeness
Mean I/Sigma(I)
CC_1/2
R_merge
R_meas
Resolution Low
Resolution High
Number of Observed Reflections
Number of Unique Reflections
Number of Possible Reflections
Anomalous Correlation
Anomalous Signal
hrsCompleteness
hrsISigma
hrsCc
hrsRMerge
hrsRMeas
hrsDataResolutionRangeLow
hrsDataResolutionRangeHigh
hrsNumberOfObservedReflections
hrsNumberOfUniqueReflections
hrsNumberOfPossibleReflections
hrsAnomalousCorrelation
hrsAnomalousSignal
Monochromator Typemonochromator
Processing SoftwareprocessingSoftware
Refinement Factors:
R-work
R-free

refinementFactorRWork
refinementFactorRFree
Macromolecule Type*macromoleculeType
Molecular WeightmolecularWeight
Entity:
ID
Sequence

entityId
entitySequence
Entity Count
Residue Count
Atom Site Count
entityCount
residueCount
atomSiteCount
PDB Deposit:
PDB Structure Title
PDB DOI
PDB Structure Author
PDB Deposit Date
PDB Release Date
PDB Revision Date

pdbTitle
pdbDoi
pdbStructureAuthor
pdbDepositDate
pdbReleaseDate
pdbRevisionDate
PDB Primary Citation:
PDB Primary Citation Title
PDB Primary Citation PubMed ID
PDB Primary Citation Author
PDB Primary Citation Journal Name
PDB Primary Citation Publication Year

citationTitle
citationPubmedId
citationAuthor
citationJournal
citationYear
name of metadata fieldjson name / keywords for Advanced Search
Metadata table